Download file
Download file
Download file
Download file
4 files

A. pisum classifier-identified bicycle genes expression scripts

posted on 2022-01-08, 02:56 authored by David Stern, Clair HanClair Han
Code for generating the A. pisum bicycle genes characterizations and expression analysis from publication "Gene structure-based homology search identifies highly divergent putative effector gene family", Stern and Han, BioRxiv

Apis_cluster_analysis_mathers_v5.5.6_22xii21.Rmd takes Apis_bicycle_classifier_0.72cutoff_genenames_v5.5.6_run2.txt as input and generates figure panel 5A. and it's corresponding plotting script Apis_DE_analysis_mathers_v5.5.6_22xii21.Rmd generate figure panels 5B and 6E.

Please contact Clair Han at with questions.

See related materials in collection at