Light shotgun Illumina resequencing of flies resulting from backcrossing a new balancer chromosome for chromosome arm 2L in D. simulans to D. mauritiana. Reads were subjected to the multiplex shotgun genotyping platform described in Andolfatto et al. (2011).
Andolfatto, Peter, Dan Davison, Deniz Erezyilmaz, Tina T Hu, Joshua Mast, Tomoko Sunayama-Morita, and David L Stern. “Multiplexed Shotgun Genotyping for Rapid and Efficient Genetic Mapping.” Genome Research 21, no. 4 (April 2011): 610–17. https://doi.org/10.1101/gr.115402.110.