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Hormaphis cornu LD analysis scripts

journal contribution
posted on 14.01.2021, 21:38 by Aishwarya Korgaonkar, Clair HanClair Han, David Stern
Code used in LD analysis and visualization of genotype heatmaps for the H. cornu target enrichment region around the dgc gene, associated with the publication "A novel family of secreted insect proteins linked to plant gall development" by Korgaonkar et al. (2021).

H. cornu genotype heatmap and LD decay heatmap for the enrichment sequencing region around dgc and zoom-in of the region harboring the key gall color GWAS SNPs
Generate figures S2A-H

Please contact Clair Han at hanc@janelia.hhmi.org with questions.

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