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bicycle_structure.Rmd (9.99 kB)

Gene structure of H. cornu bicycle genes script

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posted on 2022-01-08, 02:54 authored by David Stern, Clair HanClair Han
Code used in the characterization of H. cornu bicycle genes, associated with the publication "Gene structure-based homology search identifies highly divergent putative effector gene family", Stern and Han, BioRxiv https://doi.org/10.1101/2021.09.24.461719.
Generates all panels of Fig S1.

Input files Hcor.Augustus.updated_w_annots.3ix21_final.gff3 and gene_cluster2.names available on Janelia Figshare at https://doi.org/10.25378/janelia.17841809.

Please contact Clair Han at hanc@janelia.hhmi.org with questions.

See related materials in collection at https://doi.org/10.25378/janelia.c.5778905.