bicycle_structure.Rmd (9.99 kB)
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Gene structure of H. cornu bicycle genes script

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posted on 08.01.2022, 02:54 authored by David Stern, Clair HanClair Han
Code used in the characterization of H. cornu bicycle genes, associated with the publication "Gene structure-based homology search identifies highly divergent putative effector gene family", Stern and Han, BioRxiv
Generates all panels of Fig S1.

Input files Hcor.Augustus.updated_w_annots.3ix21_final.gff3 and gene_cluster2.names available on Janelia Figshare at

Please contact Clair Han at with questions.

See related materials in collection at