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T. nigriabdominalis classifier-identified bicycle genes expression scripts

software
posted on 11.04.2022, 19:49 authored by David Stern, Clair HanClair Han

Code for generating the T. nigriabdominalis bicycle genes characterizations and expression analysis from publication "Gene structure-based homology search identifies highly divergent putative effector gene family", Stern and Han, BioRxiv https://doi.org/10.1101/2021.09.24.461719.


Tnig_cluster_analysis_v5.5.6.Rmd

(uses Tnig_bicycle_classifier_0.72cutoff_v5.5.6.txt as input)

generates figure panels 4A-E

TnigDE_v5.5.6.Rmd generates figure panels 4F and 6D


Please contact Clair Han at hanc@janelia.hhmi.org with questions.

See related materials in collection at https://doi.org/10.25378/janelia.c.5778905.

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