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T. ulmi classifier-identified bicycle genes expression scripts

software
posted on 08.01.2022, 02:56 by David Stern, Clair HanClair Han
Code for generating the T. ulmi bicycle genes characterizations and expression analysis from publication "Gene structure-based homology search identifies highly divergent putative effector gene family", Stern and Han, BioRxiv https://doi.org/10.1101/2021.09.24.461719.

Tulm_cluster_analysis_v5.5.6.Rmd
(uses Tulm_bicycle_classifier_0.72cutoff_v5.5.6.txt as input)
generates figure panels 4A-E
Tulm_cluster_analysis_v5.5.6.Rmd generates figure panels 4F and 6D

Please contact Clair Han at hanc@janelia.hhmi.org with questions.

See related materials in collection at https://doi.org/10.25378/janelia.c.5778905.

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